熊本大学
沿岸生態学研究室
熊本大学 理学部 生物学コースの山田研究室のHPです.
藻場(海草場)・干潟・磯を対象に動物群の群集生態学や個体群生態学に関する研究を行っています.
Publications
Bold name indicates past or present members of this laboratory.
International Journals (Peer-reviewed)
46 MATSUDA, Ryuya., Katsumasa YAMADA, Daisuke HAYASAKA & Yasuhisa HENMI (2022) Effects of salinity, temperature, and immersion conditions on seed germination of invasive Spartina alterniflora Loisel (smooth cordgrass) in Japan. Regional Studies in Marine Science. 57, 102738. pdf
45. KANAYA, Gen., Katsumasa YAMADA, Hajime ITHO & Takeshi IGARASHI (2022) Life-history traits of the endangered mud snail Batillaria multiformis in their northern limit population in Mutsu Bay, Japan. Ecological Research. 37(6): 753-767. pdf
44. YOSHINO, Kenji., Katsumasa YAMADA, Masaatsu TANAKA, Gen KANAYA, Yasuhisa HENMI & Megumi YAMAMOTO (2021) Subtidal benthic communities in Minamata Bay, Japan, approximately 30 years after mercury pollution remediation involving dredging disturbance. Ecological Research. 37(1): 137-150. pdf
43. HASHIMOTO Kazumasa, Katsumasa YAMADA, Masashi SEKINO, Mayumi KOBAYASHI, Takenori SASAKI, Yuichi FUJINAMI, Masayuki YAMAMOTO, Kwang-Sik CHOI, Yasuhisa HENMI. (2021) Population genetic structure of the pen shell Atrina pectinata sensu lato (Bivalvia: Pinnidae) throughout East Asia. Regional Studies in Marine Science. 48: 102024. pdf
42. MISHIMA, Shinji, Satoshi KOBAYASHI, Katsumasa YAMADA, Yasuhisa HENMI (2021) The effects of photoperiod and temperature on embryonic diapause termination in the hermit crab Pagurus nigrofascia. Plankton and Benthos Research. 16(2): 79-83. pdf
41. YAMAKITA, Takeshisa., Katsumasa YAMADA, Hiroyuki YOKOOKA & Gen KANAYA (2020) Traits database of tidal flat macrobenthos along the Northwest Pacific coast of Japan. Ecological Research. 35(6): 1062-1072. pdf
40. KOBAYASHI, Jun., Miki YOSHIMOTO, Katsumasa YAMADA, Kazumaro OKAMURA & Takeo SAKURAI (2019) Comparison of trophic magnification factors of PCBs and PBDEs in Tokyo Bay based on nitrogen isotope ratios in bulk nitrogen and amino acids. Chemosphere. 226: 220-228 pdf
39. TOYODA, Kensuke., Kei KIMURA, Keigo OSADA, David M. WILLIAMS, Tomoko ADACHI, Katsumasa YAMADA, Yuji TOMARU (2019) Novel marine diatom ssRNA virus NitRevRNAV infecting Nitzschia reversa. Plant Ecology and Evolution. 152(2): 178-187. pdf (Open Access)
38. MIYAMOTO, Yasushi., Tadashi NAKANO, Katsumasa YAMADA, Keisuke HATAKEYAMA & Masami HAMAGUCHI (2019) Combined effects of drift macroalgal bloom and warming on occurrence and intensity of diel-cycling hypoxia in a eutrophic coastal lagoon. Estuaries and Coasts. 42: 494-503. pdf CES News!
37. YOSHINO, Kenji., Katsumasa YAMADA, & Kei KIMURA (2018) Does suspended matters drained from Isahaya freshwater reservoir cause organic enrichment of northern Ariake Bay? Journal of Oceanography. 74(6): 619-628. pdf
36. HASHIMOTO Kazumasa, Katsumasa YAMADA, Akira NAGAE & Yukihiko MATSUYAMA (2018) Lineage specific detection of the scaly form of the pen shell Atrina spp. by a loop-mediated isothermal amplification method. Fisheries Science. 84(5): 837-848. pdf
35. YAMADA, Katsumasa., Katsumi MIYAZAKI, Takeshi.TOMIYAMA, Gen KANAYA, Yoshifumi MIYAMA, Tomoyoshi YOSHINAGA, Kunihiro WAKUI, Masanori TAMAOKI & Mitsuharu TOBA (2018) Impact of sea spider parasitism on host clams: susceptibility and intensity-dependent mortality. Journal of the Marine Biological Association of the United Kingdom. 98(4): 735-742. pdf
34. KURIHARA, Takeo., Shoji NAKANO, Yukihiko MATSUYAMA, Kazumasa HASHIMOTO, Katsumasa YAMADA, Atsushi ITHO & Masaei KANEMATSU (2018) Does suspended matters drained from Isahaya freshwater reservoir cause organic enrichment of northern Ariake Bay? International Aquatic Research. 10(1): 1-11. pdf (Open Access)
33. MIYAMOTO, Yasushi., Katsumasa YAMADA, Keisuke HATAKEYAMA & Masami HAMAGUCHI (2017) Temperature-dependent adverse effects of drifting macroalgae on the survival of Manila clams in a eutrophic coastal lagoon. Plankton and Benthos Research. 12(4): 238-247. pdf (Open Access)
32. NAKANO, Tadashi., Katsumasa YAMADA, & Kazumaro OKAMURA (2017) Duration rather than frequency of hypoxia causes mass mortality in ark shells (Anadara kagoshimensis). Marine Pollution Bulletin. 125: 86-91. pdf
31. KANAYA, Gen., Takao SUZUKI, Kyoko KINOSHITA, Masatoshi MATSUMASA, Katsumasa YAMADA, Koji SEIKE, Kenji OKOSHI, Osamu MIURA, Suzuko NAKAI, Waka SATO-OKOSHI & Eisuke KIKUCHI (2017) Disaster-induced changes in coastal wetlands and soft-bottom habitats in eastern Japan– an overview on 2011 Great East Japan Earthquake. Biology International. SI36: 62–80.
30. YAMADA, Katsumasa., Yasushi MIYAMOTO, Tadashi NAKANO & Kazumaro OKAMURA (2016) Inter- and intraspecific variation in anoxic survival among three bivalve species in intertidal and subtidal areas along the coast of Japan. Plankton and Benthos Research. 11(2): 49-56. pdf (Open Access)
29. TOMIYAMA, Takeshi., Katsumasa YAMADA, Kunihiro WAKUI, Masanori TAMAOKI & Katsumi MIYAZAKI (2016) Impact of sea spider parasitism on host clams: relationships between burial patterns and parasite loads, somatic condition, and survival of host. Hydorobiologia. 770: 15-26. pdf
28. MIYAZAKI, Katsumi, Takeshi TOMIYAMA, Katsumasa YAMADA & Masanori TAMAOKI. (2015) 18s analysis on the taxonomic position of an endoparasitic pycnogonid Nymphonella tapetis (Arthropoda, Pycnogonida) in the family ascorhynchidae. Journal of Crustacean Biology. 35(4): 491-494. pdf
27. KANAYA, Gen., Yasuo NAKAMURA, Tomoyoshi KOIZUMI & Katsumasa YAMADA, (2015) Seasonal changes in infaunal community structure in a hypertrophic brackish canal: effects of hypoxia, sulfide, and predator-prey interaction. Marine Environmental Research. 108: 14-23. pdf
26. KOBAYASHI, Jun., Yuki IMUTA, Tomohiro KOMORITA, Katsumasa YAMADA, Hiroshi ISHIBASHI, Fumitaka ISHIHARA, Naoya NAKASHIMA, Jun SAKAI, Koji ARIZONO, & Minoru KOGA. (2015) Trophic magnification of polychlorinated biphenyls and polybrominated diphenyl ethers in an estuarine food web of the Ariake Sea, Japan. Chemosphere. 118: 201-206. pdf
25. YAMADA, Katsumasa., Yoshiyuki TANAKA, Takuya ERA & Masahiro NAKAOKA (2014) Environmental and spatial controls of macroinvertebrate functional assemblages in seagrass ecosystems along the Pacific coast of northern Japan. Global Ecology and Conservation. 2: 47-61. pdf (Open Access)
24. YAMADA, Katsumasa., Yasushi MIYAMOTO, Chisato FJII, Keiko YAMAGUCHI & Masami HAMAGUCHI (2014) Vertical zonation and aggregated distribution of the Manila clam on subtidal sandy flats in a coastal brackish lagoon along Sea of Japan. Marine Ecology. 35(3): 408-418. pdf
23. KANAYA, Gen., Yasuo NAKAMURA, Tomoyoshi KOIZUMI, Katsumasa YAMADA, Hiroshi KOSHIKAWA, Ayato KOHZU & Hideaki MAKI (2013) Temporal changes in carbon and nitrogen stable isotope ratios of macrozoobenthos on an artificial tidal flat facing a hypertrophic canal, inner Tokyo Bay. Marine Pollution Bulletin. 71: 179-189. pdf
22. YAMADA, Katsumasa., & Naoki, H. KUMAGAI (2012) Importance of seagrass vegetation for habitat partitioning between closely related species, mobile macrofauna Neomysis (Misidacea). Hydrobiologia. 680: 125-133. pdf
21. YAMADA, Katsumasa., Masakazu HORI, Yoshiyuki TANAKA, Natsuki HASEGAWA & Masahiro NAKAOKA (2010) Contribution of different functional groups to the diet of major predatory fishes at a seagrass meadow in northeastern Japan. Estuarine, Coastal and Shelf Science. 86: 71-82. pdf
20. YAMADA, Katsumasa., Masakazu HORI, Susumu MATSUNO, Tatsuo HAMANO & Masami HAMAGUCHI (2009) Spatial variation of quantitative color traits in green and black types of sea cucumber Apostichopus japonicus (Stichopodidae) using image processing. Fisheries Science. 75: 601-610. pdf
19. TANAKA, Yoshiyuki., Toshihiro MIYAJIMA, Katsumasa YAMADA, Masakazu HORI, Natsuki HASEGAWA, Yu UMEZAWA & Isao KOIKE (2008) Specific growth rate as a determinant of carbon isotopic composition of a temperate seagrass Zostera marina. Aquatic Botany. 89: 331-336. pdf
18. YAMADA, Katsumasa., Masakazu HORI, Yoshiyuki TANAKA, Natsuki HASEGAWA & Masahiro NAKAOKA (2007) Temporal and spatial macrofaunal community changes along a salinity gradient in seagrass meadows of Akkeshi-ko estuary and Akkeshi Bay, northern Japan. Hydrobiologia. 592: 345-358. pdf
17. YAMADA, Katsumasa., Kazutaka TAKAHASHI, Carole VALLET, Satoru TAGUCHI, & Tatsuki TODA (2007) Distribution, life history, and production of three species of Neomysis in Akkeshi-ko estuary, northern Japan. Marine Biology. 150: 905-917. pdf
Proceedings (Peer-reviewed)
16. YAMADA, Katsumasa., Kazumasa HASHIMOTO, Takenori SASAKI, Mayumi KOBAYASHI, Yasuhisa HENMI, Masashi SEKINO. Morphological variations among distinct genotypes of the pen shell Atrina pectinata in Japan and Korea. Proceedings of 2019 International Conference on climate change, disaster management and environmental sustainability, Kumamoto University. pp. 808-814.
15. KOBAYASHI, Satoshi., Katsumasa YAMADA, Kenji YOSHINO, Yasuhisa HENMI (2019) Longitudinal distribution patterns of brachyuran crab (Crustacea, Decapoda) community along tidal rivers flowing into the inner area of Ariake Bay. Proceedings of 2019 International Conference on climate change, disaster management and environmental sustainability, Kumamoto University. pp. 523-532.
14. YOSHINO, Kenji., Kei KIMURA, Naoki FUJII, Ryo ORITA, Toshiya KATANO, Yuji ITO, Katsumasa YAMADA (2019) Biophysical interactions on the succession of subtidal benthic commu-nity in the inner part of Ariake Bay. Proceedings of 2019 International Conference on climate change, disaster management and environmental sustainability, Kumamoto University. pp. 496-504.
13. YAMADA, Katsumasa., Masakazu HORI, Masahiro NAKAOKA & Masami HAMAGUCHI (2011) Temporal and spatial variation of functional-trait composition (functional diversity) of macrocrustacean communities in seagrass meadow. Crustaceana Monographs (Special edition: New Frontiers in Crustacean Biology). 15: 325-339. pdf
Japanese Journals (Peer-reviewed)
12. 尾崎竜也, 小森田智大, 山田勝雅, 田井 明. (2022) 係留系による高頻度観測とタンク法を併用した底生微細藻類の基礎生産量の定量と現場法の検証. 土木学会論文集B3(海洋開発). 78(2): 655-660. pdf
[Ozaki, T., T. Komorita, K. Yamada, A. Tai (2022) Primary production of microphytobenthos using tank method and mooting system to validate in-situ method on Midorikawa river tidal estuary, Japan. Journal of JSCE, Division B3. 78(2): 655-660. (in Japanese with English abstract)]
11. 松田竜也, 山田勝雅, 小田哲也, 長沼辰樹, 逸見泰久 (2021) 八代海湾奥部の大野川に侵入した特定外来生物ヒガタアシ(Spartina alterniflora)の分布拡大. 日本ベントス学会誌. 76: 50-58. pdf
[Matsuda, T., K. Yamada, T. Oda, T. Naganuma, Y. Henmi (2021) Expansion of an invasive alien species Spartina alterniflora that invaded the Ohno River in the inner part of the Yatsushiro Sea. Japanese Journal of Benthology. 76:50-58. (in Japanese with English abstract)]
10. 山田勝雅, 張 成年, 鳥羽光晴, 良永知義, 冨山 毅, 望月祐一, 宮﨑勝己 (2019) カイヤドリウミグモ研究のゆくえ. 生物科学. 72(2): 103-111.
[Yamada, K., S. Chow, M. Toba, T. Yoshinaga, T. Tomiyama, Y. Mochizuki, K. Miyazaki (2019) Future direction of research on Nymphonella tapetis. Biological Science. 72(2): 103-111. (in Japanese)]
9. 宮﨑勝己, 山田勝雅. (2019) カイヤドリウミグモ研究の軌跡. 生物科学. 72(2): 66-72.
[Miyazaki, K., K. Yamada. (2019) The history of study on Nymphonella tapetis in Japan. Biological Science. 72(2): 66-72 (in Japanease)]
8. 冨山 毅, 山田勝雅, 恩地啓実. (2019) カイヤドリウミグモとアサリの寄生-宿主関係. 生物科学. 72(2): 89-94.
[Tomiyama, T., K. Yamada, H. Onchi (2019) Host-parasite relationships between parasitic sea spider and the Manila clam. Biological Science. 72(2): 89-94. (in Japanease)]
7. 宮﨑勝己, 良永知義, 山下桂司, 中木 舞, 神谷享子, 恩地啓実, 山田勝雅, 望月祐一, 玉置雅紀. (2019) 技法の開発:カイヤドリウミグモの基礎生態と早期発見. 生物科学. 72(2): 95-102.
[Miyazaki, K., T. Yoshinaga, K. Yamashita, M. Nakagi, H. Onchi, K. Yamada, Y. Mochizuki, M. Tamaoki. (2019) Technical development for early detection of parasitism and study on basic ecology of Nymphonella tapetis. Biological Science. 72(2): 95-102. (in Japanese)]
6. 山田勝雅, 倉田健悟 (2018) 善か悪か?:浅場域で増大するホトトギスガイ個体群の生態系への影響と研究の動向. Laguna. 25: 55-63. pdf
[Yamada, K., K. Kurata. (2018) Right or wrong? Effect of increasing populations in Asian mussel, Arcuatula (Musculista) senhousia, on an ecosystem at the shallow coastal area and trends in biological research: a review. Laguna. 25: 55-63. (in Japanese with English abstract)]
5. 山田勝雅, 宮本 康, 畠山恵介 (2018) 中海におけるホトトギスガイのマットと大型海藻マットの空間形成. Laguna. 25: 81-92. pdf
[Yamada, K., Y. Miyamoto, K. Hatakeyama (2018) Spatial forming of mats by Asian mussel (Arcuatula senhousia) and macroalgae at meso-scale in Lake Nakaumi, Japan. Laguna. 25: 81-92. (in Japanese with English abstract)]
4. 北岡 匠, 山田勝雅, 逸見泰久 (2018) 八代海球磨川河口干潟における底生動物相の時空間変化:ホトトギスガイのマット形成が群集構造に与える影響. Laguna. 25: 93-103. pdf
[Kitaoka, T., K. Yamada, Y. Henmi (2018) Effect of mat-forming by the Asian mussel Arcuatula senhousia on spatiotemporal variation of benthic macrofaunal community structure at Kumagawa estuary tidal flat in Yatsushiro Bay, Kyushu, Japan. Laguna. 25: 93-103. (in Japanease with English abstract)]
3. 脇田和美, 山北剛久, 山田勝雅, 八木信行, 黒倉 壽 (2014) 東京湾におけるノリ養殖最適海域の推定~効率的な海域利用の検討に向けたデータ活用方策と可視化の一試行~. 日本水産学会誌. 80 (5): 689-701.pdf
[Wakita, K., T. Yamakita, K. Yamada, N. Yagi, H. Kurokura (2014) An estimate of optimum areas for Porphyra farming in Tokyo Bay: A demonstration of data utilization and visualization for discussion on better use of marine space. The Japanese Society of Fisheries Science. 80 (5): 689-701. (in Japanese with English abstract)]
(For reprints, please contact me via e-mail)
Books
2. HAYASAKA, Daisuke, Katsumasa YAMADA, Taizo UCHIDA (2016) Susceptibility of sandy-beach flora to the 2011 Tohoku-oki tsunami in northern Tohoku, Japan (Chapter 17). In Urabe J, Nakashizuka T (Eds.) Ecological impacts of tsunamis on coastal ecosystems: lessens from the Great East Japan (Earthquake. Ecological research monographs), Springer, Tokyo, Japan. pp. 271-288. pdf
1. ISHIGURO, Satoshi., Katsumasa YAMADA, Takehisa YAMAKITA, Hiroya YAMANO, Hiroyuki OGUMA, Tsuneo MATSUNAGA (2016) Classification of seagrass beds by coupling airborne LiDAR bathymetry data and digital aerial photographs (Part II: Advanced Methods of Biodiversity Monitoring, Chapter 5). In: Nakano, S., Yahara, T., Nakashizuka, T. (Eds.) Aquatic Biodiversity Conservation and Ecosystem Services (Ecological Research Monographs). Springer, Tokyo, Japan. pp. 59-70. pdf
Non-Refereed Scientific Reports & Minutes of Meeting (selected)
48. 山田勝雅, 中野 善. (2017) アサリの推移行列:個体群特性に何が起こったのか? 日本ベントス学会誌. 71(2): 111-112.(2016年度日本ベントス学会自由集会開催報告)pdf
47. 小森田智大, 山田勝雅, 内川純一. (2017) 安定した干潟生態系の構築を目指して:緑川河口干潟の地域貢献に基づく学術研究の展開. 日本ベントス学会誌. 71(2): 118-120. (2016年度日本ベントス学会自由集会開催報告)pdf
46. YAMADA, Katsumasa, Katsunori MIYAZAKI, Seinen CHOW, Toshihiro YAMAMOTO, Takeshi TOMIYAMA, Tomoyoshi YOSHINAGA, Yoshifumi MIYAMA, Masanori TAMAOKI, Mitsuharu TOBA. (2016) Life history and distribution of Nymphonella tapetis, a sea spider parasitic on the Manila clam, Ruditapes philippinarum in Tokyo Bay, Japan. Bulletin of Japan Fisheries Research and Education Agency (水産研究・教育機構研究報告). 42: 94-95. (Abstracts in Proceedings of The Third International Symposium on Manila (Asari) Clam) pdf
45. MIYAZAKI, Katsunori, Takeshi. TOMIYAMA, Katsumasa YAMADA, Masanori TAMAOKI. (2016) Morphology, distribution and mode of life in the sea spider Nymphonella spp. (Arthropoda, Pycnogonida): Potential endoparasitism on Asari outside Japan. Bulletin of Japan Fisheries Research and Education Agency (水産研究・教育機構研究報告). 42: 95-95. (Abstracts in Proceedings of The Third International Symposium on Manila (Asari) Clam) pdf
44. TOMIYAMA, Takeshi, Takashi IWASAKI, Kunihiro WAKUI, Katsumasa YAMADA, Masanori TAMAOKI, Katsunori MIYAZAKI. (2016) Dynamics of the sea spider parasitism on Asari in Matsukawaura Lagoon, Japan. Bulletin of Japan Fisheries Research and Education Agency (水産研究・教育機構研究報告). 42: 94-94. (Abstracts in Proceedings of The Third International Symposium on Manila (Asari) Clam) pdf
43. 山田勝雅, 金谷 弦, 宮崎勝己, 富山 毅, 玉置雅紀. (2015) 7) 寄生-宿主間の栄養関係に関する研究のこれまでとこれから:アサリ-カイヤドリウミグモを事例に. 日本水産学会誌 (日本水産学会水環境保全委員会, 談話会ニュース). 81(5): 888-889. pdf
42. 山田勝雅, 伊藤 篤, 長田 穣, 松山幸彦. (2015) 2.1 有明海におけるタイラギ資源の長期変遷 -過去30年の記録からみる個体群特性の変遷と資源量減少の関係-. 日本水産学会誌 (日本水産学会水環境保全委員会, 談話会ニュース). 81 (2): 310-311. pdf
41. 里居伸祐, 山田勝雅, 小國仁嗣 (2015) ひとりでやるか?みんなでやるか?:仕事における最適な作業切替時期の検討. 数理解析研究所講究録. 1966: 11-17. (ISSN 1880-2818) pdf
40. 金谷 弦, 五十嵐健志, 山田勝雅, 木村昭一 (2014) 芦崎干潟潮下帯に生息するアマモZostera marina群落の葉上動物相. むつ市文化財調査報告. 42: 55-65. pdf
39. 須黒達巳, 早坂大亮, 杉原奈央子, 野村拓志, 山田勝雅 (2014) ピットフォールトラップにより北海道の自然海岸から採集されたクモ. KISHIDAIA. 103: 80-81. pdf
38. 浜口昌巳, 堀 正和, 山田勝雅, 上村了美 (2009) 周防灘におけるアサリ・ハマグリの資源と海洋環境の関係. 水産海洋研究. 73 (4): 325-328. (NDL-OPAC)
Column
3. 關野正志, 藤原篤志, 橋本和正, 山田勝雅, 佐々木猛智. (2017) DNA多型でみるタイラギ二種の違い. 研究のうごき(中央水産研究所主要成果集). 15: 13-13. pdf
2. 山田勝雅 (2015) 思考の必要性. In: 平成26年度京都大学数理解析研究所RIMS共同研究「数学と生命現象の連関性の探求~新しいモデリングの数理~【参加報告記】. 日本数理生物学会ニュースレター. 77: 3-4. pdf
1. 山田勝雅. (2015) 善か?悪か?:汽水域に広がる「海藻溜」. 汽水域研究会ニュースレター (第8回 汽水域研究こぼれ話). 11: 2-3. pdf